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Uncultivated Oscillospiraceae bacterium UBA790 genome recovered from SRX834651

Identifiers
BioSample: SAMN06455913; Sample name: Oscillospiraceae bacterium UBA790; SRA: SRS2035258
Organism
Oscillospiraceae bacterium UBA790
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA790
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834651 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated76.95%
contamination_estimated0.34%
environmental_sampletrue
genome_coverage18.32
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747050.
Description

Uncultivated genome recovered from an assembly of the SRX834651 metagenome.

BioProjects
PRJNA378560 Bos taurus breed:Holstein
Retrieve all samples from this project

PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455913
ID:
6455913

BioProject SRA Nucleotide

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