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Uncultivated Spirochaetaceae bacterium UBA5328 genome recovered from SRX691263

Identifiers
BioSample: SAMN06453604; Sample name: Spirochaetaceae bacterium UBA5328; SRA: SRS2035615
Organism
Spirochaetaceae bacterium UBA5328
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Spirochaetaceae; unclassified Spirochaetaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA5328
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691263 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated85.06%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage14.93
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561950.
Description

Uncultivated genome recovered from an assembly of the SRX691263 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453604
ID:
6453604

BioProject SRA Nucleotide

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