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Uncultivated Negativicutes bacterium UBA1444 genome recovered from ERX250271

Identifiers
BioSample: SAMN06456298; Sample name: Negativicutes bacterium UBA1444; SRA: SRS2030508
Organism
Negativicutes bacterium UBA1444
cellular organisms; Bacteria; Bacillati; Bacillota; Negativicutes; unclassified Negativicutes
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationMalaysia
isolateUBA1444
isolation sourceclosed biodigester
metagenome sourcepalm oil mill effluent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX250271 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated78.97%
contamination_estimated1.92%
environmental_sampletrue
genome_coverage7.71
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the palm oil mill effluent metagenome reads: ERR276848.
Description

Uncultivated genome recovered from an assembly of the ERX250271 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456298
ID:
6456298

BioProject SRA Nucleotide

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