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Uncultivated Acidimicrobiia bacterium UBA2766 genome recovered from SRX560108

Identifiers
BioSample: SAMN06454303; Sample name: Acidimicrobiia bacterium UBA2766; SRA: SRS2034346
Organism
Acidimicrobiia bacterium UBA2766
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; unclassified Acidimicrobiia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Coal Oil Point, Santa Barbara, California
isolateUBA2766
isolation sourceOil polluted marine water
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX560108 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.73%
contamination_estimated2.14%
environmental_sampletrue
genome_coverage230.15
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313734.
Description

Uncultivated genome recovered from an assembly of the SRX560108 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454303
ID:
6454303

BioProject SRA Nucleotide

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