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Uncultivated Trichococcus sp. UBA802 genome recovered from SRX328066

Identifiers
BioSample: SAMN06451077; Sample name: Trichococcus sp. UBA802; SRA: SRS2033491
Organism
Trichococcus sp. UBA802
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Carnobacteriaceae; Trichococcus; unclassified Trichococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Alberta
isolateUBA802
isolation sourceclay
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX328066 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated50.86%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage37.89
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943778,SRR943781,SRR943779,SRR943780,SRR943782.
Description

Uncultivated genome recovered from an assembly of the SRX328066 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451077
ID:
6451077

BioProject SRA Nucleotide

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