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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN13920681; SRA: SRS6060579; CFSAN: CFSAN102991

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	19IA11GT10-EC
isolation source	ground turkey
source type	food
Interagency Food Safety Analytics Collaboration (IFSAC) category	turkey
collection date	2019-10
geographic location	USA:IA
isolate name alias	CFSAN102991
collected by	Iowa State U
latitude and longitude	missing
ontological term	turkey (ground or minced):FOODON_00002714
attribute_package	environmental/food/other
PublicAccession	CFSAN102991
Genus	Escherichia
Species	coli

BioProject: PRJNA292663 Escherichia coli
Retrieve all samples from this project

Submission: CFSAN; 2020-01-24

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	intermediate	==	16/8	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	8	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	resistant	==	64	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	resistant	>	4/76	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Accession:: SAMN13920681
ID:: 13920681

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Pathogen: environmental/food/other sample from Escherichia coli
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