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Uncultivated Faecalibacterium sp. UBA5659 genome recovered from SRX822248

Identifiers
BioSample: SAMN06452648; Sample name: Faecalibacterium sp. UBA5659; SRA: SRS2038667
Organism
Faecalibacterium sp. UBA5659
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Faecalibacterium; unclassified Faecalibacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5659
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822248 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.09%
contamination_estimated1.68%
environmental_sampletrue
genome_coverage18.29
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748865.
Description

Uncultivated genome recovered from an assembly of the SRX822248 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452648
ID:
6452648

BioProject SRA Nucleotide

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