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Uncultivated Sporosarcina koreensis UBA7348 genome recovered from SRX836091

Identifiers
BioSample: SAMN06454618; Sample name: Sporosarcina koreensis UBA7348; SRA: SRS2035506
Organism
Sporosarcina koreensis
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Caryophanaceae; Sporosarcina
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA7348
isolation sourceculture
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX836091 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.96%
contamination_estimated1.12%
environmental_sampletrue
genome_coverage284.88
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1750081.
Description

Uncultivated genome recovered from an assembly of the SRX836091 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454618
ID:
6454618

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