MIGS Eukaryotic sample from Amborella trichopoda

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Identifiers: BioSample: SAMN02313977; Sample name: Amtr_SantaCruz; SRA: SRS468229

Organism: Amborella trichopoda
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella

Package: MIGS: eukaryote; version 6.0

Attributes

environmental package	missing
investigation type	eukaryote
isolate	Santa Cruz
broad-scale environmental context	N/A
collection date	2001
local-scale environmental context	botanical garden
geographic location	USA: California, University of California Santa Cruz Arboretum
latitude and longitude	36.983 N 122.060 W
environmental medium	leaf
project name	Amborella Genome Sequencing Project
estimated size	870000000
isolation and growth condition	botanical garden
number of replicons	13
ploidy	diploid
propagation	cuttings
observed biotic relationship	free living
sample material processing	flash frozen
trophic level	autotroph

Description

Amborella trichopoda grown from wild collected seed at the University of California Santa Cruz Arboretum and vegetatively propagated from cuttings also located at University of Florida and Atlanta Botanic Garden. Original location of wild collected seed in New Caledonia is unknown. This is the primary isolate for sequencing the Amborella trichopoda reference genome.

Keywords: GSC:MIxS;MIGS:6.0

Links: Amborella Genome Database

BioProjects: PRJNA238126 Amborella trichopoda
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PRJNA212863 Amborella trichopoda
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