MIGS Cultured Bacterial/Archaeal sample from Capno... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00792204; Sample name: HMPREF1320; SRA: SRS295068

Organism: Capnocytophaga sp. oral taxon 335 str. F0486
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga; unclassified Capnocytophaga; Capnocytophaga sp. oral taxon 335

Attributes

collection date	not determined
estimated size	2546000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Capnocytophaga sp. oral taxon 335 F0486
geographic location	not determined
source material identifiers	BEI HM-815
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	F0486
environmental package	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft11x;38
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	CA v6.1
misc_param: HMP supersite	oral
sequencing method	Illumina HiSeq 2000
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
BioSampleModel	Generic