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MAG for uncultured Solirubrobacterales bacterium

Identifiers
BioSample: SAMEA114834673; SRA: ERS17259540
Organism
uncultured Solirubrobacterales bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Thermoleophilia; Solirubrobacterales; environmental samples
Attributes
broad-scale environmental contextUrban
collection date2021-11-06
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD10043.bin.2.21
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114834673
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:31Z
INSDC statuspublic
Submitter IdMFD10043.bin.2.21
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score84.18
completeness softwareCheckM2
contamination score0.89
geographic location (latitude)56.075
geographic location (longitude)12.5417
local environmental contextGreenspaces
metagenomic sourcesoil metagenome
sample derived fromERS14381641
scientific_nameuncultured Solirubrobacterales bacterium
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Solirubrobacterales bacterium, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114834673
ID:
45973817

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