Metagenome-assembled genome: binchicken_co107_135

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Result Filters

Organism: uncultured Alcaligenaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	not provided
environmental medium	aquatic
geographic location	not applicable
investigation type	metagenome-assembled genome
isolation source	hot springs metagenome
project name	Raw sequencing reads from thermal pool sediment at Liard River Hot Springs
sample name	binchicken_co107_135
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	binchicken_co107_135
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	97.47
completeness software	CheckM2;1.0.2;default
contamination score	0.97
geographic location (latitude)	not provided
geographic location (longitude)	not provided
local environmental context	hot springs biome
metagenomic source	hot springs metagenome
sample derived from	SAMN12723035,SAMN15739864
scientific_name	uncultured Alcaligenaceae bacterium
sequencing method	NextSeq 550,Illumina NovaSeq 6000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10095362,SRR12686701 of study SRP221252.