Metagenome-assembled genome: SRP268394_co1_60

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Result Filters

Organism: uncultured Lewinella sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Saprospiria; Saprospirales; Lewinellaceae; Lewinella; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	2017-12-03
environmental medium	aquatic
geographic location	Australia
investigation type	metagenome-assembled genome
isolation source	seawater metagenome
project name	16S rRNA and metagenome sequencing of a manipulative experiment on the Ulva australis surface-associated bacterial community
sample name	SRP268394_co1_60
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP268394_co1_60
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	80.29
completeness software	CheckM2;1.0.2;default
contamination score	1.96
geographic location (latitude)	-33.992714
geographic location (longitude)	151.231208
local environmental context	seawater biome
metagenomic source	seawater metagenome
sample derived from	SAMN15346755,SAMN15346754
scientific_name	uncultured Lewinella sp.
sequencing method	NextSeq 500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12112857,SRR12112858 of study SRP268394.