Metagenome-assembled genome: binchicken_co334_126

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Result Filters

Organism: uncultured Syntrophomonadaceae bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Syntrophomonadaceae; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	not provided
environmental medium	aquatic
geographic location	not applicable
investigation type	metagenome-assembled genome
isolation source	marine sediment metagenome
project name	The study aims at describing the identity and activity of airborne microorganisms as well as the potential sources from where the cells got aerosolized.
sample name	binchicken_co334_126
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	binchicken_co334_126
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	98.09
completeness software	CheckM2;1.0.2;default
contamination score	2.24
geographic location (latitude)	not provided
geographic location (longitude)	not provided
local environmental context	marine sediment biome
metagenomic source	marine sediment metagenome
sample derived from	SAMN04328853,SAMN08777217
scientific_name	uncultured Syntrophomonadaceae bacterium
sequencing method	Illumina HiSeq 2500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR3081468,SRR6963311 of study SRP068000.