Metagenome-assembled genome: SRP268622_co1_547

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Result Filters

Organism: uncultured Desulfitobacterium sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Desulfitobacteriaceae; Desulfitobacterium; environmental samples

Attributes

broad-scale environmental context	terrestrial
collection date	not provided
environmental medium	terrestrial
geographic location	China
investigation type	metagenome-assembled genome
isolation source	manure metagenome
project name	We applied metagenomic sequencing to investigate the microbial functions during bovine manure composting
sample name	SRP268622_co1_547
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP268622_co1_547
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	VAMB;3.0.2;default
completeness score	67.65
completeness software	CheckM2;1.0.2;default
contamination score	2.64
geographic location (latitude)	30.6
geographic location (longitude)	120.1
local environmental context	manure biome
metagenomic source	manure metagenome
sample derived from	SAMN15355926,SAMN15355924
scientific_name	uncultured Desulfitobacterium sp.
sequencing method	Illumina HiSeq 2500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12081734,SRR12081736 of study SRP268622.