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Pathogen: clinical or host-associated sample from Shigella sonnei

Identifiers: BioSample: SAMN43694156; Sample name: SH39

Organism: Shigella sonnei
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

strain	SH39
collected by	National Health Institute Doutor Ricardo Jorge
collection date	2018
geographic location	Portugal
host	Homo sapiens
host disease	not collected
isolation source	culture
latitude and longitude	missing

BioProject: PRJNA1160238
Retrieve all samples from this project

Submission: ISCIII, Camille Jacqueline; 2024-09-12

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
nalidixic acid	resistant	==	6	mm	disk diffusion				CLSI
ciprofloxacin	resistant	==	15	mm	disk diffusion				CLSI
ampicillin	resistant	==	6	mm	disk diffusion				CLSI
amoxicillin-clavulanic acid	susceptible	==	20	mm	disk diffusion				CLSI
cefotaxime	susceptible	==	29	mm	disk diffusion				CLSI
cefoxitin	susceptible	==	29	mm	disk diffusion				CLSI
ceftazidime	susceptible	==	30	mm	disk diffusion				CLSI
cefepime	susceptible	==	36	mm	disk diffusion				CLSI
tetracycline	resistant	==	6	mm	disk diffusion				CLSI
trimethoprim	resistant	==	6	mm	disk diffusion				CLSI
sulfamethoxazole	resistant	==	6	mm	disk diffusion				CLSI
chloramphenicol	susceptible	==	22	mm	disk diffusion				CLSI
gentamicin	susceptible	==	19	mm	disk diffusion				CLSI
meropenem	susceptible	==	31	mm	disk diffusion				CLSI

Accession:: SAMN43694156
ID:: 43694156

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Pathogen: clinical or host-associated sample from Shigella sonnei
Pathogen: clinical or host-associated sample from Shigella sonnei

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