U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

MAG for uncultured Methanoregulaceae archaeon

Identifiers
BioSample: SAMEA114810567; SRA: ERS17235434
Organism
uncultured Methanoregulaceae archaeon
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; environmental samples
Attributes
broad-scale environmental contextFreshwater
collection date2021-07-26
environmental mediumnot collected
geographic locationDenmark
isolation sourcesediment
project nameMicroflora Danica
sample nameMFD01476.bin.2.40
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114810567
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:05Z
INSDC statuspublic
Submitter IdMFD01476.bin.2.40
assembly qualitySingle contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score89.67
completeness softwareCheckM2
contamination score1.66
geographic location (latitude)56.50596583
geographic location (longitude)8.826613964
local environmental contextStanding freshwater
metagenomic sourcesediment metagenome
sample derived fromERS14381676
scientific_nameuncultured Methanoregulaceae archaeon
taxonomic identity markermulti-marker approach
Description

MQ MAG for uncultured Methanoregulaceae archaeon, recovered from an environmental sample from Denmark

BioProject
PRJEB58634 MFD-LR MAGs — long-read metagenome assembled genomes from the Microflora Danica sequencing project
Retrieve all samples from this project

Submission
EBI; 2024-12-26
Accession:
SAMEA114810567
ID:
45984456

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center