LV_5_samp_4311_9. Mid Gulf_2022

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN41711560; Sample name: ER46 sp._LV_5_9. Mid Gulf_2022

Organism: Opitutaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; Opitutia; Opitutales; Opitutaceae; unclassified Opitutaceae

Attributes

isolate	samp_4311_concoct_342
isolation source	lake water
collection date	2022-06-25
depth	1m
derived from	SAMN41659674
sample type	metagenomic assembly
metagenome source	freshwater metagenome
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	Kenya:Lake Victoria
latitude and longitude	0.2466 S 34.60327 E
chlorophyll	33.86 (ug/L)
collection method	Van dorn collection
conductivity	144.7(uS/cm)
dissolved oxygen	7.17mg/L
nitrate	32.1 (ug/L)
pH	7.6
sample collection device or method	Van dorn
sample storage temperature	-80 degree C
size fraction selected	0.22 micron
soluble reactive phosphorus	43.5(ug/L)
temperature	25degree C
total depth of water column	6.8m
turbidity	14.5NTU
metagenomic	1
environmental-sample	1
geo_loc_me	Lake Victoria
Completeness(%)	81.51
Contamition (%)	5.94
Strain Heterogeneity (%)	36.36
Size (Mbp)	3.781189
No. Of Contigs	1532
GC_Content (%)	68.2
N50	2803
file	samp_4311_concoct_342