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Animal sample from Pangshura tecta (Indian roofed turtle) for VGP reference genome, rPanTec1

Identifiers
BioSample: SAMN43277916; Sample name: Animal sample from Pangshura tecta (Indian roofed turtle) for VGP reference genome, rPanTec1; SRA: SRS23417329
Organism
Pangshura tecta (Indian roofed turtle)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Batagurinae; Pangshura
Package
Model organism or animal; version 1.0
Attributes
isolaterPanTec1
development stageadult
collection date2023-04-03
geographic locationUSA: Bronx, New York
sexmale
tissueskeletal muscle
biomaterial providerWildlife Conservation Society
collected byWildlife Conservation Society
latitude and longitude40.8538 N 73.8755 W
storage conditions-80oC
treatmentFlash frozen
Tube IDN2023-0214
Description

The Indian roofed turtle (Pangshura tecta) is a species of turtle in the family Geoemydidae. It can be distinguished by the distinct "roof" at the topmost part of the shell. It is found in the major rivers of South Asia. It is a common pet in the Indian Subcontinent (from Wikipedia entry). This sample was collected from a male individual at the Bronx Zoo in New York City. The sample was coordinated by the Wildlife Conservation Society to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.

BioProjects
PRJNA1193231
Retrieve all samples from this project

PRJNA1150337 Pangshura tecta isolate:rPanTec1
Retrieve all samples from this project

PRJNA1150336 Pangshura tecta isolate:rPanTec1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2024-08-20
Accession:
SAMN43277916
ID:
43277916

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