Metagenome-assembled genome: SRS15956993__bin57

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Result Filters

Organism: Allobaculum stercoricanis
cellular organisms; Bacteria; Bacillati; Bacillota; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Allobaculum

Attributes

broad-scale environmental context	host-associated habitat
collection date	2022
environmental medium	feces
geographic location	China
investigation type	metagenome-assembled genome
isolation source	cat gut
project name	cat_mags
sample name	SRS15956993__bin57
ENA-CHECKLIST	ERC000050
ENA-FIRST-PUBLIC	2023-10-21T00:32:41Z
ENA-LAST-UPDATE	2023-10-21T00:32:41Z
External Id	SAMEA114501515
INSDC center alias	INRA-META
INSDC center name	Institut National pour la Recherche Agronomique (FRANCE)
INSDC first public	2023-10-21T00:32:41Z
INSDC last update	2023-10-21T00:32:41Z
INSDC status	public
Submitter Id	SRS15956993__bin57
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	SPAdes 3.15.5
binning parameters	COMEBin defaults.
binning software	COMEBin v1.0.0
completeness score	86.35
completeness software	CheckM2
contamination score	0.14
geographic location (latitude)	0.0
geographic location (longitude)	0.0
local environmental context	host-associated habitat
metagenomic source	gut metagenome
sample derived from	SRS15956993
scientific_name	Allobaculum stercoricanis
sequencing method	Illumina NovaSeq 6000
taxonomic identity marker	multi-marker approach