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Human gut genome

Identifiers
BioSample: SAMEA5850662; SRA: ERS3639189
Organism
uncultured Bifidobacterium sp.
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationAustria
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-01159
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:21Z
ENA-LAST-UPDATE2019-08-09T12:56:07Z
External IdSAMEA5850662
INSDC center nameEMG
INSDC first public2019-08-06T09:56:21Z
INSDC last update2019-08-09T12:56:07Z
INSDC statuspublic
Submitter IdMGYG-HGUT-01159
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Bifidobacterium sp.
completeness score97.58
contamination score0.96
metagenomic sourcehuman gut metagenome
sample derived fromERS608501
scientific_nameuncultured Bifidobacterium sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5850662
ID:
12519632

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