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Uncultivated Bifidobacterium sp. UBA4282 genome recovered from SRX290706

Identifiers
BioSample: SAMN06456461; Sample name: Bifidobacterium sp. UBA4282; SRA: SRS2032806
Organism
Bifidobacterium sp. UBA4282
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; unclassified Bifidobacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA4282
isolation sourcelow methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290706 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.64%
contamination_estimated0.76%
environmental_sampletrue
genome_coverage16.63
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873596.
Description

Uncultivated genome recovered from an assembly of the SRX290706 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456461
ID:
6456461

BioProject SRA Nucleotide

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