Metagenome-assembled genome: MGG05177_1680015485

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Result Filters

Organism: uncultured Bacilli bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; environmental samples

Attributes

broad-scale environmental context	Host-associated
collection date	2017-10-25
environmental medium	Feces
geographic location	China
investigation type	metagenome-assembled genome
isolation source	mouse gut metagenome
project name	This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR3199548 of study ERP113840.
sample name	MGG05177_1680015485
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-04-21
ENA-LAST-UPDATE	2023-04-21
External Id	SAMEA112936222
INSDC center alias	UNIVERSITY OF GENEVA
INSDC center name	UNIVERSITY OF GENEVA
INSDC first public	2023-04-21T00:23:04Z
INSDC last update	2023-04-21T00:23:04Z
INSDC status	public
Submitter Id	MGG05177_1680015485
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	metaSpades_v3.13
binning parameters	default
binning software	metagenome_atlas_v2.3
completeness score	93.26
completeness software	checkM_v1.1
contamination score	2.25
geographic location (latitude)	not provided
geographic location (longitude)	not provided
local environmental context	Mouse digestive system
metagenomic source	mouse gut metagenome
sample derived from	SAMEA5382925
scientific_name	uncultured Bacilli bacterium
sequencing method	Illumina NovaSeq 6000
taxonomic identity marker	multi-marker approach

Description: This is a Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP113840. This sample represents a Metagenome-assembled genome from the metagenomic run ERR3199548.