MIP2461_WGS_raw data_library TAGMENTATION

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Result Filters

Organism: Hafnia paralvei
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Hafniaceae; Hafnia

Attributes

collection date	2009-01-01
experimental factor	not collected
geographic location	France
investigation type	bacteria_archaea
isolate	MIP2461
isolation source	bacterial strain isolated from fresh salmon
project name	SEABIOMIC
sample name	sam_MIP2461_TAG
description	Raw data were obtained by sequencing on a MinIOn MK1C DNA extracts from bacterial isolates. Library was prepared using Rapid Barcoding sequencing kit.Demultiplexing of the fast5 files was conducted with Guppy v6.1.1.
sample name	MIP2461_TAG
strain	MIP2461
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2023-04-14
ENA-LAST-UPDATE	2023-04-14
External Id	SAMEA112774572
INSDC center alias	Ifremer
INSDC center name	Ifremer
INSDC first public	2023-04-14T00:46:14Z
INSDC last update	2023-04-14T00:46:14Z
INSDC status	public
Submitter Id	sam_MIP2461_TAG
broker name	Bioinformatics Core Facility of Ifremer (French Research Institute for Exploitation of the Sea)
collecting institution	Ifremer, France
common name	Hafnia paralvei
environmental_sample	No
geographic location (latitude)	not collected
geographic location (longitude)	not collected
geographic location (region and locality)	Nantes
scientific_name	Hafnia paralvei
sequencing method	Nanopore Sequencing