| collection date | 2020-05-06 |
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| broad-scale environmental context | marine biome [ENVO:00000447] |
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| local-scale environmental context | microbial feature [ENVO:00002150] |
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| environmental medium | coastal sea water [ENVO:00002150] |
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| geographic location | North Sea |
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| investigation type | metagenome-assembled genome |
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| isolation source | marine water |
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| project name | 2020 Helgoland Spring Bloom Metagenomes |
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| sample name | ILMN-20200506-m56 |
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| ENA-CHECKLIST | ERC000047 |
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| ENA-FIRST-PUBLIC | 2022-09-23 |
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| ENA-LAST-UPDATE | 2022-09-23 |
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| External Id | SAMEA110069377 |
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| INSDC center alias | Max Planck Institute for Marine Microbiology |
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| INSDC center name | Max Planck Institute for Marine Microbiology |
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| INSDC first public | 2022-09-23T08:24:33Z |
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| INSDC last update | 2022-09-23T08:24:33Z |
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| INSDC status | public |
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| Submitter Id | ILMN-20200506-m56 |
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| assembly quality | Many fragments with little to no review of assembly other than reporting of standard assembly statistics |
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| assembly software | SPADES v3.10 |
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| binning parameters | anvi'o 6.2, default parameters |
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| binning software | CONCOCT v1.1.0, MaxBin2 v2.2.7, Metabat2 v2.12.1, Binsanity v0.4.4, and integration using DAS_Tool v1.1.2. Manual refinement with anvi'o v6.2 |
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| completeness score | 73.37 |
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| completeness software | CheckM v1.1.3 |
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| contamination score | 0.61 |
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| geographic location (latitude) | 54.19 |
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| geographic location (longitude) | 7.9 |
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| metagenomic source | marine metagenome |
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| sample derived from | ERS12037271 |
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| sequencing method | Illumina HiSeq 3000 |
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| taxonomic identity marker | multi-marker approach (GTDB-tk v1.7, GTDB v202) |
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