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Candidatus Nomurabacteria bacterium

Identifiers
BioSample: SAMEA14306345; SRA: ERS11897662
Organism
Candidatus Nomurabacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; Parcubacteria group; Candidatus Nomurabacteria; unclassified Candidatus Nomurabacteria
Attributes
collection date2018-03-29
broad-scale environmental contextfreshwater lake
local-scale environmental contextlake
environmental mediumfresh water
geographic locationRussia
investigation typemetagenome-assembled genome
isolation sourceFreshwater lake
project namePRJNA615165
sample nameBaikal-1350m-133
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2022-06-30
ENA-LAST-UPDATE2022-06-30
External IdSAMEA14306345
INSDC center aliasBIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center nameBIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC first public2022-06-30T00:19:14Z
INSDC last update2022-06-30T00:19:14Z
INSDC statuspublic
Submitter IdBaikal-1350m-133
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMEGAHIT; kmer set 29,49,69,89,109,119,129,149
binning parameterscoverage and kmer
binning softwareMetaBAT2
completeness score68.44
completeness softwarecheckm
contamination score0.19
geographic location (latitude)51.833333
geographic location (longitude)104.783333
metagenomic sourcefreshwater metagenome
sample derived fromSRS6873687
sequencing methodIllumina Hiseq X Ten
taxonomic identity markermulti-marker approach
Description

Patescibacteria assembled from Lake Baikal

BioProject
PRJEB35640 Freshwater metagenomes from different European and Asian lakes
Retrieve all samples from this project

Submission
EBI; 2022-07-01
Accession:
SAMEA14306345
ID:
29454771

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