MIGS Cultured Bacterial/Archaeal sample from Staph... - BioSample

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MIGS Cultured Bacterial/Archaeal sample from Staphylococcus capitis SK14

Identifiers: BioSample: SAMN00000713; Sample name: HMP042-454 Sample; SRA: SRS001041

Organism: Staphylococcus capitis SK14
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

collection date	not determined
estimated size	2436000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Staphylococcus capitis SK14
geographic location	not determined
source material identifiers	BEI HM-117
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	SK14
environmental package	missing
isolation source	skin from right arm of human male
finishing strategy (depth of coverage)	Level 5: Non-contiguous Finished18x;32
project_type	Reference Genome
misc_param: HMP body site	Right arm
nucleic acid extraction	not determined
assembly	Newbler v. 1.1.03.24-64-7
misc_param: HMP supersite	skin
sequencing method	not determined
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf

Description

Staphylococcus capitis is a gram-positive bacterium that inhabits the skin. The bacterium has been isolated from the bloodstream of a premature infant that died of sepsis.

Keywords: GSC:MIxS;MIGS:6.0