Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Lagorchestes conspicillatus (spectacled hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

geographic location	Australia
identified by	Jane N Bell
investigation type	phylogenetic study
sample name	53529
sex	not determined
tissue	liver
BPA_library_ID	53529
BPA_sample_ID	40820
CALLABLE	1808016
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:40:00Z
External Id	SAMEA7321228
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:40:00Z
INSDC status	public
LOW_COVERAGE	170754
NO_COVERAGE	382
ReadLength	100bp
Submitter Id	53529
TCCP_ID	53529_AHGVYVBCX2_CGAGATC_S95
bioproject_accession	PRJEB39788
class	Mammalia
collection	EBU
common name	spectacled hare-wallaby
depthmean	174.3
depthmedian	122
family	Macropodidae
genus	Lagorchestes
geographic location (region and locality)	Queensland
institution_name	Australian Museum
location_text	Hells Gate
order	Diprotodontia
phylum	Chordata
scientific_name	Lagorchestes conspicillatus
sequencing method	Illumina SBS, short PE reads
species	conspicillatus
state_or_region	Queensland
tissue_number	SHW1682
tissue_preservation	frozen
totalmapped2tgt	0.7374
totalpaired	0.7149
totalreadsstart	5039644
voucher_number	no voucher
voucher_or_tissue_number	SHW1682
wild_captive	wild