Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Caloprymnus campestris (desert rat kangaroo)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Potoroidae; Caloprymnus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	52888
sex	male
tissue	skin
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/96f00916-8ffd-4bb8-badd-8e2ca418d5b4
BPA_library_ID	52888
BPA_sample_ID	40266
CALLABLE	1248212
DNA extraction method	Qiagen DNEasy modified for trace samples
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:30Z
ENA-LAST-UPDATE	2020-09-25T00:34:51Z
External Id	SAMEA7321037
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:30Z
INSDC last update	2020-09-25T00:34:51Z
INSDC status	public
LOW_COVERAGE	63210
NO_COVERAGE	174
ReadLength	100bp
Submitter Id	52888
TCCP_ID	52888_AH5VVVBCX2_GCCTACG_S67
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	desert rat kangaroo
depthmean	94.95
depthmedian	80
family	Potoroidae
genus	Caloprymnus
geographic location (region and locality)	South Australia
institution_name	Australian Museum
location_text	Killipamina E Lake Eyre
order	Diprotodontia
phylum	Chordata
scientific_name	Caloprymnus campestris
sequencing method	Illumina SBS, short PE reads
species	campestris
state_or_region	South Australia
tissue_number	AM M.21674
tissue_preservation	dried
totalmapped2tgt	0.6449
totalpaired	0.6371
totalreadsstart	2275977
voucher_number	AM M.21674
voucher_or_tissue_number	AM M.21674