Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Planigale maculata (pygmy planigale)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Planigale

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	53400
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/76595fea-88c8-440a-8e03-4273c591fd8e
BPA_library_ID	53400
BPA_sample_ID	40694
CALLABLE	1687703
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:37:04Z
External Id	SAMEA7321120
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:37:04Z
INSDC status	public
LOW_COVERAGE	180257
NO_COVERAGE	161
ReadLength	100bp
Submitter Id	53400
TCCP_ID	53400_AHGVYGBCX2_GACGGCG_S62
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	pygmy planigale
decimal_latitude	-28.63
decimal_longitude	153.62
depthmean	85.5
depthmedian	50
family	Dasyuridae
genus	Planigale
geographic location (region and locality)	New South Wales
institution_name	Australian Museum
location_text	Byron Bay
order	Dasyuromorphia
phylum	Chordata
scientific_name	Planigale maculata
sequencing method	Illumina SBS, short PE reads
species	maculata
state_or_region	New South Wales
tissue_number	EBU11476
tissue_preservation	frozen
totalmapped2tgt	0.4664
totalpaired	0.443
totalreadsstart	3757788
voucher_number	AM M.35892.001
voucher_or_tissue_number	AM M.35892.001