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Animal sample from Alosa sapidissima (American shad) for VGP genome fAloSap1

Identifiers
BioSample: SAMN18857608; Sample name: Animal sample from Alosa sapidissima (American shad) for VGP genome fAloSap1; SRA: SRS18002895
Organism
Alosa sapidissima (American shad)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Alosinae; Alosa
Package
Model organism or animal; version 1.0
Attributes
isolatefAloSap1
development stageadult
sexmale
tissuemuscle
biomaterial providerNina Overgaard Therkildsen
collected byReid Hyle
collection date2020-02-07
geographic locationUSA: St. Johns River, Florida
latitude and longitude28.438892 N 81.894728 W
specimen voucherAsapiF_1
storage conditionsfrozen -80oC
treatmentflash frozen
Description

The American shad (Alosa sapidissima) is a species of anadromous clupeid fish (born in fresh water, but live as adults in salt water), distributed on the North American coast of the North Atlantic, from Newfoundland to Florida. The were common food for European colonist of the Eastern United States (source Wikipedia). This sample was collected from an adult female by Reid Hyle for Nina Overgaard Therkildsen, from the St. Johns River, Florida, USA , and used to generate a high-quality reference genome assembly for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab, at the Rockefeller University, coordinated by Olivier Fedrigo and Erich D. Jarvis.

BioProjects
PRJNA736150 Alosa sapidissima isolate:fAloSap1
Retrieve all samples from this project

PRJNA728146 Alosa sapidissima isolate:fAloSap1
Retrieve all samples from this project

PRJNA728145 Alosa sapidissima isolate:fAloSap1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2021-04-23
Accession:
SAMN18857608
ID:
18857608

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