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Fram Strait water column MAG- FRAM18_bin072

Identifiers
BioSample: SAMEA7768551; SRA: ERS5515800
Organism
uncultured Pelagibacterales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Candidatus Pelagibacterales; environmental samples
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427908, run ERR4918861 and assembly ERZ1699361
sample nameFRAM18_bin072
ENA first public2021-01-07
ENA last update2021-03-30
ENA-CHECKLISTERC000011
External IdSAMEA7768551
INSDC center aliasMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:46Z
INSDC last update2021-03-30T10:47:46Z
INSDC statuspublic
Submitter IdFRAM18_bin072
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMegahit v1.2.9
binning softwareMetabat v2.12.1, DASTool v1.1.1
completeness score100
completeness softwareCheckM v1.0.13
contamination score1.2
metagenomic sourcemarine metagenome
sample derived fromERS5427908, ERR4918861, ERZ1699361
sequencing methodIllumina HiSeq3000 metagenome
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768551
ID:
17267973

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