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Pathogen: clinical or host-associated sample from Citrobacter freundii

Identifiers: BioSample: SAMN14653284; Sample name: Citrobacter freundii SCAID PHRX1-2019

Organism: Citrobacter freundii
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

strain	SCAID PHRX1-2019
collected by	Scientific Center for anti-infectious Drugs, Laboratory of Microbiology
collection date	2019-08-01
geographic location	Kazakhstan: Almaty
host	Homo sapiens
host disease	Tonsilitis
isolation source	oropharyngeal swab of pharynx
latitude and longitude	43.23 N 76.88 E
host age	55
host disease outcome	Recovery
host disease stage	Acute tonsilitis
host sex	female
passage history	2

BioProject: PRJNA627194 Clinical isolates sequencing
Retrieve all samples from this project

Submission: Scientific Center for Anti-infectious Drugs (SCAID), Ilya Korotetskiy; 2020-04-21

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin	resistant	==	6	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
ceftriaxone	susceptible	==	23	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
ciprofloxacin	susceptible	==	26	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
gentamicin	susceptible	==	21	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
clindamycin	resistant	==	6	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
tobramycin	susceptible	==	15	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
cefepime	resistant	==	6	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
cefazolin	resistant	==	14	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
oxacillin	resistant	==	6	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
levofloxacin	susceptible	==	22	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
meropenem	susceptible	==	22	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
erythromycin	resistant	==	12	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
azithromycin	resistant	==	6	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
imipenem	susceptible	==	31	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
streptomycin	resistant	==	6	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
carbenicillin	intermediate	==	21	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
ampicillin	intermediate	==	15	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI
amikacin	susceptible	==	20	mm	disk diffusion	Scan 500	Interscience	Disk difussion method in Mueller-Hinton Agar	CLSI

Accession:: SAMN14653284
ID:: 14653284

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Pathogen: clinical or host-associated sample from Citrobacter freundii
Pathogen: clinical or host-associated sample from Citrobacter freundii

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