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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN13482839; SRA: SRS5761190; CFSAN: CFSAN101940

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	19NC10PC10_EC
isolation source	ground pork (Sus scrofa)
Interagency Food Safety Analytics Collaboration (IFSAC) category	pork
source type	animal
collected by	NCSU CVM Thakur Lab
collection date	2019-10-18
geographic location	USA:NC
latitude and longitude	missing
isolate name alias	CFSAN101940
attribute_package	environmental/food/other
ontological term	pork (ground):FOODON_03309969, sus scrofa:NCBITAXON_9823
PublicAccession	CFSAN101940
ProjectAccession	PRJNA292663
Species	coli
Genus	Escherichia

BioProject: PRJNA292663 Escherichia coli
Retrieve all samples from this project

Submission: CFSAN; 2019-12-04

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	==	4/2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	8	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	8	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	susceptible	==	8	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	susceptible	<=	16	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	susceptible	<=	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.12/2.38	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Accession:: SAMN13482839
ID:: 13482839

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Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

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