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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN12359564; Sample name: CVM N18EC1294; SRA: SRS5171980

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

strain	CVM N18EC1294
collected by	FDA
collection date	2018
geographic location	USA:SC
isolation source	Chicken Thighs
latitude and longitude	missing

BioProject: PRJNA292663 Escherichia coli
Retrieve all samples from this project

Submission: FDA-CVM, CVM FDA; 2019-07-25

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	susceptible	==	2/1	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ampicillin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
azithromycin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
cefoxitin	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
meropenem	susceptible	<=	0.06	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
nalidixic acid	susceptible	==	2	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
streptomycin	susceptible	==	4	mg/L	MIC	Sensititre	Trek	GM-NEG	NARMS
sulfisoxazole	susceptible	<=	16	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
tetracycline	resistant	>	32	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.12/2.38	mg/L	MIC	Sensititre	Trek	GM-NEG	CLSI

Accession:: SAMN12359564
ID:: 12359564

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

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