UBA11236 strain AM_1606

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Result Filters

Attributes

isolate	AM_1606
sample name	AM_1606
sample type	metagenomic assembly
ENA first public	2020-02-25
ENA last update	2018-02-26
ENA-CHECKLIST	ERC000011
External Id	SAMEA104651826
INSDC center alias	Universidade Federal de Sao Carlos - UFSCar
INSDC center name	Universidade Federal de Sao Carlos - UFSCar
INSDC first public	2020-02-25T04:07:52Z
INSDC last update	2018-02-26T10:47:54Z
INSDC status	public
Submitter Id	AM_1606
annotation_method	Prokka 1.12
assembly method	Megahit v.1
biosamplemodel	Microbe, viral or environmental
completeness_estimated	96.4
contamination_estimated	0.61
environmental sample	Yes
geographic location (country and/or atlantic ocean)	Brazil
geographic location (region and locality)	Amazon river Estuary
mapping_method	BWA (BWA-MEM)
metagenomic	TRUE
quality_assessment_method	CheckM
refinement_method	RefineM

Description: Uncultivated UBA11236 strain AM_1606 genome recovered from a co-assembly of the SRR1786279, SRR1786281, SRR1786608 and SRR1786616 metagenomes.