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MIGS Cultured Bacterial/Archaeal sample from Shigella boydii

Identifiers
BioSample: SAMN07821153; Sample name: Escherichia coli str. 80
Organism
Shigella boydii
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
strain80
collection date2007-09
broad-scale environmental contextUrban
local-scale environmental contextHospital
environmental mediumStool samples
geographic locationBrazil: Manaus
hostHomo sapiens
isolation and growth conditionStool samples in swabs were incubated in Luria Bertani broth at 37ᵒC, overnight. Lactose nonfermenting colonies were isolated on MacConkey lactose agar (MC), Salmonella-Shigella (SS), and xylose lysine deoxycholate (XLD) agar.
latitude and longitude3.42487 S 59.574150 W
number of replicons1
reference for biomaterialhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4020526/
host age4 years old
host diseaseDiarrheal disease
host sexmale
subsource notenegative motility; negative for glucose, indol, citrate, H2S, gas and ureate; lysine postive
Description

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA415104
Retrieve all samples from this project

Submission
Instituto Leonidas e Maria Deane - Fiocruz Amazonia, Joao Victor Vercosa; 2017-10-21
Accession:
SAMN07821153
ID:
7821153

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