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Pathogen: clinical or host-associated sample from Escherichia coli

Identifiers
BioSample: SAMN10620088; Sample name: URMC_8_E_Col
Organism
Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
strainURMC_8
collected byHeba Mostafa
collection date2017
geographic locationUSA: Rochester, NY
hostHomo sapiens
host diseaseurinary tract infection
isolation sourceurine
latitude and longitude43.1566 N 77.6088 W
BioProject
PRJNA510429 Escherichia coli
Retrieve all samples from this project

Submission
URMC, Heba Mostafa; 2018-12-20
Antibiogram
AntibioticResistance phenotypeMeasurement signMeasurementMeasurement unitsLaboratory typing methodLaboratory typing platformVendorLaboratory typing method version or reagentTesting standard
ampicillinresistant>=32mg/LMICCLSI
amikacinsusceptible<=2mg/LMICCLSI
aztreonamresistant==16mg/LMICCLSI
ciprofloxacinresistant>=4mg/LMICCLSI
ceftriaxoneresistant>=64mg/LMICCLSI
cefazolinresistant>=64mg/LMICCLSI
ertapenemsusceptible<=0.5mg/LMICCLSI
nitrofurantoinsusceptible<=16mg/LMICCLSI
cefepimesusceptible==2mg/LMICCLSI
gentamicinresistant>=16mg/LMICCLSI
imipenemsusceptible==29mmdisk diffusionCLSI
levofloxacinresistant==6mmdisk diffusionCLSI
meropenemsusceptible<=0.25mg/LMICCLSI
moxifloxacinresistant==6mmdisk diffusionCLSI
tigecyclinesusceptible<=0.5mg/LMICCLSI
tobramycinintermediate==8mg/LMICCLSI
Accession:
SAMN10620088
ID:
10620088

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