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Pathogen: Bos taurus-associated sample of Escherichia coli O26

Identifiers
BioSample: SAMN08724660; Sample name: EcRM10386
Organism
Escherichia coli O26 str. RM10386
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli O26
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
strainRM10386
collected byUSDA ARS PSM
collection date2009-11
geographic locationUSA: Salinas, California
hostBos taurus
host diseasen/a
isolation sourcefeces
latitude and longitude36.68 N 121.67 W
pathotypeSTEC
serotypeO26
Description

The rise in foodborne-related outbreaks of non O157 shiga-toxin producing E. coli (STECs) emphasizes the importance of developing improved methods to rapidly detect and characterize STECs. The major serovars of STEC associated with illness have been O26, O111, O103, O121, O43, and O145, accounting for 25-50% of human illness caused by STECs and, in some cases, severe illness comparable to illness caused by E. coli O157:H7. Sequencing of STECs from the agriculturally important region of the California central coast will address the diversity of genomic content and physiology of STECs compared to E. coli O157.

BioProject
PRJNA69935 Escherichia coli O26 str. RM10386
Retrieve all samples from this project

Submission
United States Department of Agriculture, Agricultural Research Service, Craig Parker; 2018-03-16
Accession:
SAMN08724660
ID:
8724660

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