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Uncultivated Lachnospiraceae bacterium UBA7279 genome recovered from SRX331752

Identifiers
BioSample: SAMN06450940; Sample name: Lachnospiraceae bacterium UBA7279; SRA: SRS2033657
Organism
Lachnospiraceae bacterium UBA7279
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; unclassified Lachnospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Wyoming
isolateUBA7279
isolation sourceRumen fluid
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX331752 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.71%
contamination_estimated3.06%
environmental_sampletrue
genome_coverage143.04
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948136.
Description

Uncultivated genome recovered from an assembly of the SRX331752 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450940
ID:
6450940

BioProject SRA Nucleotide

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