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Uncultivated Neorhizobium sp. UBA5916 genome recovered from SRX111044

Identifiers
BioSample: SAMN06451018; Sample name: Neorhizobium sp. UBA5916; SRA: SRS2032175
Organism
Neorhizobium sp. UBA5916
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium; unclassified Neorhizobium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5916
isolation sourcepinewood nematode
metagenome sourceBursaphelenchus xylophilus metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX111044 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.29%
contamination_estimated4.22%
environmental_sampletrue
genome_coverage72.66
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the Bursaphelenchus xylophilus metagenome reads: SRR389065.
Description

Uncultivated genome recovered from an assembly of the SRX111044 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451018
ID:
6451018

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