U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

Uncultivated bacterium UBP4_UBA6127 genome recovered from SRX327521

Identifiers
BioSample: SAMN06453266; Sample name: bacterium UBP4_UBA6127; SRA: SRS2033312
Organism
bacterium UBP4_UBA6127
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; unclassified Bacteria candidate phyla
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Syncrude tailings pond, Wood Buffalo, Alberta
isolateUBA6127
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327521 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.81%
contamination_estimated3.37%
environmental_sampletrue
genome_coverage12.24
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943315,SRR943314,SRR943313,SRR943312,SRR942927,SRR943311,SRR943309.
Description

Uncultivated genome recovered from an assembly of the SRX327521 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453266
ID:
6453266

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center