U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

Uncultivated Spirochaetaceae bacterium UBA5743 genome recovered from SRX210886

Identifiers
BioSample: SAMN06451741; Sample name: Spirochaetaceae bacterium UBA5743; SRA: SRS2032438
Organism
Spirochaetaceae bacterium UBA5743
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Spirochaetaceae; unclassified Spirochaetaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Northern Alberta
isolateUBA5743
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX210886 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated61.65%
contamination_estimated1.48%
environmental_sampletrue
genome_coverage110.96
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636559.
Description

Uncultivated genome recovered from an assembly of the SRX210886 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451741
ID:
6451741

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center