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Uncultivated Idiomarina abyssalis UBA3616 genome recovered from ERX556322

Identifiers
BioSample: SAMN06454529; Sample name: Idiomarina abyssalis UBA3616; SRA: SRS2031694
Organism
Idiomarina abyssalis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA3616
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX556322 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.24%
contamination_estimated0.42%
environmental_sampletrue
genome_coverage23.57
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599360.
Description

Uncultivated genome recovered from an assembly of the ERX556322 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454529
ID:
6454529

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