U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

Uncultivated Porphyromonadaceae bacterium UBA2741 genome recovered from SRX331733

Identifiers
BioSample: SAMN06454043; Sample name: Porphyromonadaceae bacterium UBA2741; SRA: SRS2033540
Organism
Porphyromonadaceae bacterium UBA2741
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Wyoming
isolateUBA2741
isolation sourceRumen fluid
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX331733 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated71.27%
contamination_estimated1.10%
environmental_sampletrue
genome_coverage9.71
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR948119.
Description

Uncultivated genome recovered from an assembly of the SRX331733 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454043
ID:
6454043

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center