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Uncultivated Micavibrio sp. UBA2341 genome recovered from SRX646153

Identifiers
BioSample: SAMN06455653; Sample name: Micavibrio sp. UBA2341; SRA: SRS2034424
Organism
Micavibrio sp. UBA2341
cellular organisms; Bacteria; Pseudomonadati; Bdellovibrionota; Bdellovibrionia; Bdellovibrionales; Pseudobdellovibrionaceae; Micavibrio; unclassified Micavibrio
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAustralia: Brisbane, Thorneside Wastewater Treatment Plant
isolateUBA2341
isolation sourceactivated sludge
metagenome sourcebioreactor sludge metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX646153 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.26%
contamination_estimated0.96%
environmental_sampletrue
genome_coverage22.49
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor sludge metagenome reads: SRR1506983.
Description

Uncultivated genome recovered from an assembly of the SRX646153 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455653
ID:
6455653

BioProject SRA Nucleotide

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