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Uncultivated Hyphomonadaceae bacterium UBA2389 genome recovered from SRX646157

Identifiers
BioSample: SAMN06451932; Sample name: Hyphomonadaceae bacterium UBA2389; SRA: SRS2034508
Organism
Hyphomonadaceae bacterium UBA2389
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomonadales; Hyphomonadaceae; unclassified Hyphomonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAustralia: Brisbane, Thorneside Wastewater Treatment Plant
isolateUBA2389
isolation sourceactivated sludge
metagenome sourcebioreactor sludge metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX646157 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated89.45%
contamination_estimated0.71%
environmental_sampletrue
genome_coverage13.51
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor sludge metagenome reads: SRR1506987.
Description

Uncultivated genome recovered from an assembly of the SRX646157 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451932
ID:
6451932

BioProject SRA Nucleotide

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