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Uncultivated Campylobacter jejuni UBA1824 genome recovered from SRX252167

Identifiers
BioSample: SAMN06452966; Sample name: Campylobacter jejuni UBA1824; SRA: SRS2032683
Organism
Campylobacter jejuni
cellular organisms; Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUnited Kingdom: England
isolateUBA1824
isolation sourceCecal contents
metagenome sourcechicken gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX252167 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.04%
contamination_estimated0.83%
environmental_sampletrue
genome_coverage17.2
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the chicken gut metagenome reads: SRR789046.
Description

Uncultivated genome recovered from an assembly of the SRX252167 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452966
ID:
6452966

BioProject SRA Nucleotide

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