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Uncultivated Prochlorococcus sp. UBA1528 genome recovered from ERX555967

Identifiers
BioSample: SAMN06457348; Sample name: Prochlorococcus sp. UBA1528; SRA: SRS2031273
Organism
Prochlorococcus sp. UBA1528
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Synechococcales; Prochlorococcaceae; Prochlorococcus; unclassified Prochlorococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1528
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX555967 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated84.01%
contamination_estimated6.57%
environmental_sampletrue
genome_coverage27.88
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599052.
Description

Uncultivated genome recovered from an assembly of the ERX555967 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457348
ID:
6457348

BioProject SRA Nucleotide

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