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Uncultivated Sphingomonadales bacterium UBA656 genome recovered from SRX748867

Identifiers
BioSample: SAMN06455002; Sample name: Sphingomonadales bacterium UBA656; SRA: SRS2036282
Organism
Sphingomonadales bacterium UBA656
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; unclassified Sphingomonadales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationItaly:Voltri Massif, Liguria
isolateUBA656
isolation sourceVoltri Massif travertine
metagenome sourceaquatic metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX748867 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.44%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage170.95
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1636514.
Description

Uncultivated genome recovered from an assembly of the SRX748867 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455002
ID:
6455002

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